Install Cydia Package Without Dependencies

Dear all, I am trying to install a private package, with its dependencies. However, both install.packages('sand_1.0.tar.gz', dependencies=TRUE, repos=NULL, type='source') and install.packages('sand_1.0.tar.gz', dependencies='Suggests', repos=NULL, type='source') fail to install suggested packages: > packageDescription('sand')$Suggests [1] 'network, sna, ape, ergm, mixer, vioplot, ROCR, fdrtool, huge' Based on the docs, I got the (obviously wrong) impression, that it was possible to install suggested packages. From?install.packages, dependencies argument: ‘TRUE’ means to use ‘c('Depends', 'Imports', 'LinkingTo', 'Suggests')’ for ‘pkgs’ and ‘c('Depends', 'Imports', 'LinkingTo')’ for added dependencies: this installs all the packages needed to run ‘pkgs’, their examples, tests and vignettes (if the package author specified them correctly). > library(ergm) Error in library(ergm): there is no package called ‘ergm’ > library(huge) Error in library(huge): there is no package called ‘huge’ What am I doing wrong, and more importantly, what is the correct way to install _all_ dependencies of a package? Thanks, Best, Gabor ______________________________________________ mailing list PLEASE do read the posting guide and provide commented, minimal, self-contained, reproducible code.

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> Dear all, > > I am trying to install a private package, with its dependencies. However, both > > install.packages('sand_1.0.tar.gz', dependencies=TRUE, repos=NULL, > type='source') > > and > > install.packages('sand_1.0.tar.gz', dependencies='Suggests', > repos=NULL, type='source') > > fail to install suggested packages: > >> packageDescription('sand')$Suggests > [1] 'network, sna, ape, ergm, mixer, vioplot, ROCR, fdrtool, huge' > > Based on the docs, I got the (obviously wrong) impression, that it was > possible to install suggested packages. From?install.packages, > dependencies argument: > > ‘TRUE’ means to use ‘c('Depends', 'Imports', 'LinkingTo', > 'Suggests')’ for ‘pkgs’ and ‘c('Depends', 'Imports', > 'LinkingTo')’ for added dependencies: this installs all the > packages needed to run ‘pkgs’, their examples, tests and > vignettes (if the package author specified them correctly). > >> library(ergm) > Error in library(ergm): there is no package called ‘ergm’ >> library(huge) > Error in library(huge): there is no package called ‘huge’ > > What am I doing wrong, and more importantly, what is the correct way > to install _all_ dependencies of a package? > > Thanks, Best, > Gabor ______________________________________________ mailing list PLEASE do read the posting guide and provide commented, minimal, self-contained, reproducible code. > Dear all, > > I am trying to install a private package, with its dependencies.

However, both > > install.packages('sand_1.0.tar.gz', dependencies=TRUE, repos=NULL, > type='source') > > and > > install.packages('sand_1.0.tar.gz', dependencies='Suggests', > repos=NULL, type='source') > > fail to install suggested packages: > > > packageDescription('sand')$Suggests > [1] 'network, sna, ape, ergm, mixer, vioplot, ROCR, fdrtool, huge' > > Based on the docs, I got the (obviously wrong) impression, that it was > possible to install suggested packages. From?install.packages, > dependencies argument: > > ‘TRUE’ means to use ‘c('Depends', 'Imports', 'LinkingTo', > 'Suggests')’ for ‘pkgs’ and ‘c('Depends', 'Imports', > 'LinkingTo')’ for added dependencies: this installs all the > packages needed to run ‘pkgs’, their examples, tests and > vignettes (if the package author specified them correctly). > > > library(ergm) > Error in library(ergm): there is no package called ‘ergm’ > > library(huge) > Error in library(huge): there is no package called ‘huge’ > > What am I doing wrong, and more importantly, what is the correct way > to install _all_ dependencies of a package? The problem is with repos=NULL (i.e. A local install).

Since none of those dependencies are local, they aren't found and won't be installed. I imagine some package has a function that does what you want, but I don't know it. It wouldn't be hard to put one together as follows: 1.

Install your package without its dependencies. Use tools::package_dependencies() to find the (non-recursive) dependencies. Install those, with their dependencies. You could add a step to filter the list in 2 so that you don't re-install something that is already there. Duncan Murdoch ______________________________________________ mailing list PLEASE do read the posting guide and provide commented, minimal, self-contained, reproducible code. > On Tue, Dec 17, 2013 at 11:36 AM, Duncan Murdoch > wrote: [.] >> I imagine some package has a function that does what you want, but I don't >> know it.

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